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Challenges, progress, and future perspectives for cyanobacterial polyhydroxyalkanoate production

Authors: Estel Rueda, Eva Gonzalez-Flo, Soumila Mondal, Karl Forchhammer, Dulce María Arias, Katharina Ludwig, Bernhard Drosg, Ines Fritz, C. Raul Gonzalez-Esquer, Sara Pacheco, Joan García

Status: Published

Year: 2024

Journal: Reviews in Environmental Science and Bio/Technology

Volume/Issue: 23

Pages: 321–350

URL/DOI: https://doi.org/10.1007/s11157-024-09689-0

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Microalgae harvesting for wastewater treatment and resources recovery: A review

Authors: Etiele Greque de Morais, Igor Carvalho Fontes Sampaio, Eva Gonzalez-Flo, Ivet Ferrer, Enrica Uggetti, Joan García

Status: Published

Year: 2023

Journal: New Biotechnology

Volume/Issue: 78

Pages: 84-94

URL/DOI: https://www.sciencedirect.com/science/article/pii/S1871678423000535?via%3Dihub

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New strategy for bioplastic and exopolysaccharides production: Enrichment of field microbiomes with cyanobacteria

Authors: Beatriz Altamira-Algarra, Estel Rueda, Artai Lage, David San León, Juan F. Martínez-Blanch, Juan Nogales, Joan García, Eva Gonzalez-Flo

Status: Published

Year: 2023

Journal: New Biotechnology

Volume/Issue: 78

Pages: 141-149

URL/DOI: https://www.sciencedirect.com/science/article/pii/S1871678423000560?via%3Dihub

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SBML2HYB: a Python interface for SBML compatible hybrid modeling

Authors: Jose Pinto, Rafael S. Costa, Leonardo Alexandre, Joao Ramos, Rui Oliveira

Status: Published

Year: 2023

Journal: Bioinformatics

Volume/Issue: 39

Pages: btad044

URL/DOI: https://doi.org/10.1093/bioinformatics/btad044

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Perpetual bioplastic production by a cyanobacteria-dominated microbiome

Authors: Beatriz Altamira-Algarra, Artai Lage, Ana Lucía Meléndez, Marc Arnau, Eva Gonzalez-Flo, Joan García

Status: Published

Year: 2023

Journal: bioRxiv

URL/DOI: https://doi.org/10.1101/2023.11.06.565755

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Development of an Automated Online Flow Cytometry Method to Quantify Cell Density and Fingerprint Bacterial Communities

Authors: Juan López-Gálvez, Konstanze Schiessl, Michael D. Besmer, Carmen Bruckmann, Hauke Harms and Susann Müller

Status: Published

Year: 2023

Journal: Cells

Volume/Issue: 12/12

Pages: 1559

URL/DOI: https://doi.org/10.3390/cells12121559

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Species composition determines bioplastics production in photosynthetic microbiomes: strategy to enrich cyanobacteria PHB-producers

Authors: Beatriz Altamira-Algarra, Artai Lage, Joan García, Eva Gonzalez-Flo

Status: Published

Year: 2023

Journal: bioRxiv

URL/DOI: https://doi.org/10.1101/2023.05.30.542808

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Exploiting synergies between microbial electrochemical technologies and synthetic biology

Authors: Bin Lai, Jens Krömer, Federico Aulenta, Hui Wu, Pablo Ivan Nikel

Status: Published

Year: 2023

Journal: Microbial Biotechnology

Volume/Issue: 16

Pages: 488

URL/DOI: https://doi.org/10.1111/1751-7915.14208

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Poster - GALLANT: a standardized workflow for multi strain genome-scale metabolic modeling

Authors: David San León Granado, Juan Nogales Enrique

Status: Published

Year: 2023

URL/DOI: https://f1000research.com/posters/12-717

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Poster - A promising Computational pipeline for microbial consortia analysis using Genome-scale metabolic models

Authors: David San León, Beatriz Altamira-Algarra, Eva González-Flo, Joan García, Juan Nogales

Status: Published

Year: 2023

URL/DOI: https://zenodo.org/records/8171140

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Poster - Insights on Metabolic Features of Bacillus subtilis Based on Multistrain Genome-Scale Metabolic Modeling

Authors: David San León Granado, Blas Blázquez, Juan Nogales

Status: Published

Year: 2023

URL/DOI: https://zenodo.org/records/8171332

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A general deep hybrid model for bioreactor systems: Combining first principles with deep neural networks

Authors: José Pinto, Mykaella Mestre, J. Ramos, Rafael S.Costa, Gerald Striedner, Rui Oliveira

Status: Published

Year: 2022

Journal: Computers & Chemical Engineering

Volume/Issue: 165

Pages: 107952

URL/DOI: https://doi.org/10.1016/j.compchemeng.2022.107952

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The Impact of the Antibiotic Fosfomycin on Wastewater Communities Measured by Flow Cytometry

Authors: Shuang Li, Zishu Liu, Christine Süring, Luyao Chen, Susann Müller, Ping Zeng

Status: Published

Year: 2022

Journal: Sec. Systems Microbiology

Volume/Issue: 12

Pages: 737831

URL/DOI: https://doi.org/10.3389/fmicb.2021.737831

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Automatic, fast, hierarchical, and non-overlapping gating of flow cytometric data with flowEMMi v2

Authors: Carmen Bruckmann, Susann Müller, Christian Höner zu Siederdissen

Status: Published

Year: 2022

Journal: Computational and Structural Biotechnology Journal

Volume/Issue: 20

Pages: 6473-6489

URL/DOI: https://doi.org/10.1016/j.csbj.2022.11.033

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Enhancing tellurite and selenite bioconversions by overexpressing a methyltransferase from Aromatoleum sp. CIB

Authors: Elena Alonso-Fernandes, Helga Fernández-Llamosas, Irene Cano, Cristina Serrano-Pelejero, Laura Castro, Eduardo Díaz, Manuel Carmona

Status: Published

Year: 2022

Journal: Microbial Biotechnology

Volume/Issue: 16/5

Pages: 915-930

URL/DOI: https://doi.org/10.1111/1751-7915.14162

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